Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX392553: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-282704' containing sample 'Staphylococcus aureus M1294'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.1M spots, 626M bases, 286.7Mb downloads

UUID: ba9ab5a0-b755-4661-ab17-89decee46fdd

Design: Illumina sequencing of Staphylococcus aureus M1294 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA220129 • SRP034486 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1294

SAMN02360936 • SRS515599 • All experiments • All runs

Organism: Staphylococcus aureus M1294

Library:

Name: Pond-282704

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 411007.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WXI8

material_type: DNA:DNA Somatic

product_order: PDO-2121

product_part_number: P-MCV-0001

project: G48358

research_project: RP-433

root_sample_id: SM-4CQOU

sample_id: SM-4WXI8

work_request: 38308

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-18 11:59:18.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.1M spots, 626M bases, 286.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050668	3,098,927	626M	286.7Mb	2013-12-16

ID:: 563408

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